Fig. 1 | Scientific Reports

Fig. 1

From: Whole-cell modeling predicts alternative proteome allocation strategies in the archaeon Methanococcus maripaludis

Fig. 1

Overview of the pcMMP model. This figure was adapted from Halim et al.18. The black and blue reactions are from the iMR539 model and the new reactions in pcMMP, respectively. These new reactions allow the model to translate peptides and assemble them into ribosomes, enzymatic complexes, and the UP proteins. The new reactions also contain rRNA, tRNA, and mRNA transcriptional reactions. For each complex, we added a dilution reaction that determines the diluted abundances to the daughter cell. The model description is provided in the Supplementary Information file.

Back to article page