Abstract
In the present work, we present a two-dimensional soft sphere granular system, with inclination, that models the transition from an amorphous solid to the crystalline phase by shear cycles induced by cyclic deformations of the boundary. To simulate an effective temperature, the system is subjected to vibration. Under these conditions, the system exhibits a controlled transition to hexagonal order, where the crystallization rate and extent depend critically on the shear frequency. The study focuses on the analysis of the effect of the shear frequency in phase change, and introduces a dimensionless shear frequency \(\tilde{f} = f_s \tau _r\), where \(\tau _r = \sqrt{m/k}\) is the intrinsic relaxation timescale of the particles, to identify the regimes in which mechanical annealing is effective. The soft granular particles used are polyacrylamide hydrogel spheres, with an estimated Young’s modulus of the order of \(10^4\) Pa, consistent with previous measurements for single-network polyacrylamide gels. Hexagonal order is measured in terms of the sixth-bond orientational order parameter \(\psi '_{6}\). By following the temporal evolution of this parameter, we find that low shear frequencies on the order of \(10^{-3}\) Hz (i.e., \(\tilde{f} \ll 1\)) favor the growth of hexagonal grains, while higher frequencies tend to reduce hexagonal order, leading to an unstable structure. Additionally, we characterize particle dynamics through autocorrelation measurements in the time series of \(\psi '_{6}\) using Fourier spectral analysis (FA). For all cases with non-zero shear frequency, the power spectra follow a power law, \(P(f) \propto 1/f^{\beta }\) with \(\beta > 1\), indicating non-stationarity. In contrast, for the static (0 Hz in shear frequency) case, the power spectrum is flat (\(\beta \approx 0.04\)), suggesting stationary white noise behavior in the time series.
Data availability
The datasets used and/or analyzed during the current study are available from the corresponding author (F.L.G.) upon reasonable request.
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Funding
This work was supported by the Dirección General de Asuntos del Personal Académico (DGAPA), Universidad Nacional Autónoma de México (UNAM), through grant PAPIIT IN115124.
The authors also acknowledge financial support from the Sistema Nacional de Investigadoras e Investigadores (SNII) of the Secretaría de Ciencia, Humanidades, Tecnología e Innovación (Secihti), Mexico, including the stipends and Postdoctoral Fellowships awarded to C.T.-I. (CVU: 425089) and F.L.G. (CVU: 607354).
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F.L.G. conceived the system, performed experiments, analyzed results, drafted and revised the manuscript and ensured its integrity. C.T.-I. performed Fourier Analysis, reviewed the manuscript and ensured its integrity. R.F. analyzed results, reviewed the manuscript and ensured its integrity. All authors approved the final version.
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Supplementary Information
Supplementary Video S1 Title: Vibrated reference system without shear Legend: This video shows the evolution of the granular layer under vertical vibration only. It demonstrates that in the absence of shear, the system remains disordered. The video is accelerated to 3269.66% of its original speed (32.7×). (mp4 38060KB)
Supplementary Video S2 Title: System under mechanical annealing with cyclic shear (0.1 Hz) Legend: This video shows the evolution of the system under cyclic shear at 0.1 Hz with a maximum deformation of 0.41 radians. Crystalline domains grow progressively due to the mechanical annealing process. The video is accelerated to 1393.22% of its original speed (13.9×). (mp4 38243KB)
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Tapia-Ignacio, C., Fossion, R.Y.M. & López-González, F. Mechanical annealing in a soft granular layer under cyclic shear at varying frequencies. Sci Rep (2026). https://doi.org/10.1038/s41598-026-39600-6
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DOI: https://doi.org/10.1038/s41598-026-39600-6