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Prevalence of nosocomial infections and antibiotic resistance patterns in Iranian hospitals over five years
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  • Published: 21 February 2026

Prevalence of nosocomial infections and antibiotic resistance patterns in Iranian hospitals over five years

  • Masoumeh Beig1 na1,
  • Mohammad Sholeh1 na1,
  • Reza Fadaei Nobari2,
  • Zohreh Abbaspour3,
  • Mojtaba Akbari4,
  • Mansour Siavash4,
  • Ramesh Hosseinkhani5 &
  • …
  • Hamid Solgi6,7 

Scientific Reports , Article number:  (2026) Cite this article

We are providing an unedited version of this manuscript to give early access to its findings. Before final publication, the manuscript will undergo further editing. Please note there may be errors present which affect the content, and all legal disclaimers apply.

Subjects

  • Diseases
  • Health care
  • Medical research
  • Microbiology

Abstract

Hospital-acquired infections (HAIs) are a global concern for patient safety and healthcare quality. In Iran, the prevalence of HAIs and rising antibiotic resistance among key pathogens pose significant challenges to patient care and healthcare systems. This study examines the prevalence of HAIs, resistance patterns, and infection rates in Iranian hospitals from 2019 to 2023. This cross-sectional retrospective study (2019–2023) analyzed HAIs across 38 hospitals in Isfahan Province, Iran, using data from the Health Deputy of Isfahan University of Medical Sciences, focusing on demographics, infection types, microbial pathogens, and device-associated infections. Infection proportion and associated mortality rates for the specified infection types were calculated per 1,000 patient-days using data sourced from diverse clinical settings. Pathogen identification employed microbiological and molecular techniques, while antibiotic resistance testing adhered to Clinical and Laboratory Standards Institute guidelines. Statistical analysis using SPSS and R Studio evaluated infection prevalence, microbial trends, and resistance patterns stratified by demographics and locations. Between 2019 and 2022, the proportion of patients with HAIs remained stable at approximately 5%. The most common HAIs were urinary tract infections (UTIs), pneumonia, and surgical site infections, caused by pathogens such as Acinetobacter baumannii, Klebsiella pneumoniae, and Escherichia coli, which exhibited significant resistance to carbapenems and third-generation cephalosporins. Infection rates varied across regions and healthcare facilities, reflecting notable geographical disparities. Intensive care units and transplant units had the highest rates, while psychiatry, ENT, and ophthalmology departments had fewer cases. Elderly patients (65+) were most affected, with men prone to ventilator-associated pneumonia and women to UTIs. Alarmingly, resistance among Gram‑negative pathogens has increased markedly, exceeding 70% for several major antibiotic classes in 2023. Acinetobacter spp. displayed the highest resistance levels, including ceftazidime 94.9% (95% CI: 93.4–96.4), fluoroquinolones 90.9% (95% CI: 88.8–93.0), aminoglycosides 84.9% (95% CI: 82.3–87.4), and carbapenems 93.3% (95% CI: 91.5–95.1), while susceptibility to colistin remained largely preserved (3.8% resistance; 95% CI: 1.6–8.3). Klebsiella spp. also exhibited high resistance to third‑ and fourth‑generation cephalosporins 88.0% (95% CI: 86.3–89.6) and β‑lactam/β‑lactamase inhibitor combinations 86.6% (95% CI: 84.0–89.0). In contrast, Escherichia coli and Pseudomonas aeruginosa showed comparatively lower resistance across most antibiotic categories. The study underscores the need for enhanced infection control, antibiotic stewardship, and targeted strategies to reduce HAIs and resistance. These strategies aim to improve patient outcomes and alleviate healthcare burdens in Iranian hospitals.

Data availability

The data that support the findings of this study are available from the corresponding author upon reasonable request.

Abbreviations

HAIs:

Hospital-acquired infections

UTIs:

Urinary tract infections

WHO:

World Health Organization

MRSA:

Methicillin-resistant Staphylococcus aureus

ICU:

Intensive care units

MDRO:

Multidrug-resistant organisms

VAP:

Ventilator-associated pneumonia

CA-BSI:

Catheter-associated bloodstream infections

ESBL:

Extended-spectrum beta-lactamase

CA-UTI:

Catheter-associated urinary tract infection

SSIs:

Surgical site infections

CDC/NHSN:

Centers for Disease Control and Prevention/National Healthcare Safety Network

NAC:

non-albicans Candida

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Acknowledgements

The authors are grateful for all infection control supervisors in the studied hospitals.

Funding

This study was funded by the Isfahan University of Medical Sciences (No. 240480).

Author information

Author notes
  1. Masoumeh Beig and Mohammad Sholeh contributed equally to this work.

Authors and Affiliations

  1. Department of Bacteriology, Pasteur Institute of Iran, Tehran, Iran

    Masoumeh Beig & Mohammad Sholeh

  2. Disease Manager Isfahan Province Health Centre, vice president of health, Isfahan University of Medical Sciences, Isfahan, Iran

    Reza Fadaei Nobari

  3. Department preventing and combating infectious diseases, vice president of health, Isfahan University of Medical Sciences, Isfahan, Iran

    Zohreh Abbaspour

  4. Isfahan Endocrine and Metabolism Research Center, Isfahan University of Medical Sciences, Isfahan, Iran

    Mojtaba Akbari & Mansour Siavash

  5. Deputy of Public Health, Isfahan University of Medical Sciences, Isfahan, Iran

    Ramesh Hosseinkhani

  6. Amin Hospital, Isfahan University of Medical Sciences, Isfahan, Iran

    Hamid Solgi

  7. Department of Bacteriology and Virology, School of Medicine, Isfahan University of Medical Sciences, Isfahan, Iran

    Hamid Solgi

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Contributions

H. S, M. A, M. B and M. Sh conceived and designed the survey. R. FN, Z. A, M. A, M. S and H. S performed the data collection. M. B, M. Sh and H. S analysed data. M. B, M. Sh and H. S draft writing, design and manuscript writing. All the authors reviewed the final version of the manuscript and agreed to its publication.

Corresponding author

Correspondence to Hamid Solgi.

Ethics declarations

Competing interests

The authors declare no competing interests.

Ethics approval and consent to participate

The study was approved by the Ethical Committee of the Isfahan University of Medical Sciences (No. IR.ARI.MUI.REC.1404.104). Due to the retrospective design of the study, informed consent was waived.

Consent for publication

Not applicable.

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Supplementary Information

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Supplementary Material 1

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Cite this article

Beig, M., Sholeh, M., Nobari, R.F. et al. Prevalence of nosocomial infections and antibiotic resistance patterns in Iranian hospitals over five years. Sci Rep (2026). https://doi.org/10.1038/s41598-026-40693-2

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  • Received: 15 September 2025

  • Accepted: 16 February 2026

  • Published: 21 February 2026

  • DOI: https://doi.org/10.1038/s41598-026-40693-2

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Keywords

  • Hospital-acquired infections
  • Antibiotic resistance
  • Infection control
  • Healthcare systems
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