Table 2 Association of previously reported SNPs on GWAS study with CSC.

From: Genome-wide association analyses identify two susceptibility loci for pachychoroid disease central serous chorioretinopathy

SNP

Genes

CHR

Position

Effect allele

EAF in CSC

(N = 610)

EAF in control

(N = 2850)

OR (95% CI)

P*

Effect directions as reported

rs1329428

CFH

1

196702810

T

0.506

0.466

1.17 (1.03–1.32)

1.45 × 10−2

+

rs11865049

SLC7A5

16

87874140

A

0.078

0.069

1.15 (0.91–1.44)

0.24

+

  1. CHR chromosome, EAF effect allele frequency in the discovery stage, CSC central serous chorioretinopathy, OR odds ratio, CI confidence interval
  2. *P-values were derived using logistic regression analysis
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