Table 1 De novo assembly of transcriptomes of W. japonica, A. rusticana and B. juncea.

From: Brassicaceae transcriptomes reveal convergent evolution of super-accumulation of sinigrin

 

W. japonica

A. rusticana

B. juncea

 

Unigene

Transcripts

Unigene

Transcripts

Unigene

Transcripts

 

Total number

Percentage (%)

Total number

Percentage (%)

Total number

Percentage (%)

Total number

Percentage (%)

Total number

Percentage (%)

Total number

Percentage (%)

300–500

19,024

35.45

44,418

24.27

21,907

35.75

65,804

28.97

21,324

30.78

65,998

20.99

500–1000

16,333

30.44

61,058

33.36

21,920

35.77

93,992

41.38

23,108

33.35

115,261

36.66

1000–2000

12,511

23.32

54,235

29.63

14,190

23.15

57,177

25.17

18,358

26.50

101,617

32.32

2000+

5792

10.79

23,341

12.75

3266

5.33

10,197

4.49

6,489

9.37

31,493

10.02

Total number

53,660

 

183,052

 

61,283

 

227,170

 

69,279

 

314,369

 

Total length

53,183,810

 

204,136,944

 

52,378,102

 

197,708,225

 

68,610,536

 

338,263,682

 

N50 length

1407

 

1485

 

1081

 

1049

 

1322

 

1350

 

Mean length

991

 

1115

 

855

 

870

 

990

 

1076

 
Back to article page