Fig. 3: Characterization of ScNifHHt. | Communications Biology

Fig. 3: Characterization of ScNifHHt.

From: Exploiting genetic diversity and gene synthesis to identify superior nitrogenase NifH protein variants to engineer N2-fixation in plants

Fig. 3

a UV–vis absorption spectra of as-isolated and air-exposed ScNifHHt. b Processing site (black arrow) of COX4 mitochondria targeting signal (blue) as determined by N-terminal sequencing of ScNifHHt. The conversion of Q to E (marked by *) could be due to deamination processes. c EPR signal of as-isolated ScNifHHt (190 μM) compared to NifHAv (71.2 μM). Experimental data (black lines) and simulations (blue lines) of each protein are shown together with g values. d Schematic representation of NifH-dependent activities tested in eh. Figure adapted from Burén et al.9. Copyright 2020 ACS under CC BY 4.0 http://creativecommons.org/licenses/by/4.0. e In vitro P-cluster maturation of apo-NifDKAv present in CFE of A. vinelandii DJ77 (ΔnifH) after addition of ScNifHHt or NifHAv as indicated (±). Tetrathiomolybdate was added (following step I + II) to inhibit further apo-NifDKAv activation during the ARA (step III). Data represent mean values (n = 2 technical replicates). f NifB-co and NifB-dependent in vitro FeMo-co synthesis using ScNifHHt or NifHAv. Tetrathiomolybdate was added (following step II) to inhibit further apo-NifDKAv activation during the ARA (step III). A 20:1 molar ratio of ScNifHHt to NifDKAv was used in the ARA (step III). Data represent mean values (n = 2 technical replicates (NifB-co + NifHAv), n = 3 technical replicates (NifB-co + ScNifHHt), n = 4 technical replicates (NifBAv + NifHAv), n = 5 technical replicates (ScNifBMt + ScNifHHt), n = 3 technical replicates (ScNifBMt), n = 4 technical replicates (ScNifHHt)). Blue and red dots correspond to independent experiments. g Titration of NifDKAv activity with ScNifHHt. Positive control reactions performed with NifHAv and NifDKAv at 40:1 molar ratio gave 1692 ± 4 units (nmol ethylene formed per min and mg of NifDKAv). Reactions lacking NifH (negative control) gave 2.5 ± 0.8 units. Data represent mean values (n = 2 technical replicates). h ARA (red dots, left y-axis) and N2-reduction assay (blue squares, right y-axis) using ScNifHHt and NifDKAv (step III). NifHAv was used as control. Data represent mean values (n = 4 technical replicates).

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