Table 2 Antibodies and fluorophores.

From: An in vitro tumorigenesis model based on live-cell-generated oxygen and nutrient gradients

Antibody & fluorophore

Clone

Vendor – Catalog number

Host

Dilution

Time

Temp.

E-cadherin, direct conjugate (AlexaFluor-488)

24E10

Cell Signaling Technologies – 3199S

Rabbit

1:100

O/N

4 °C

Vimentin, direct conjugate (AlexaFluor-555)

D21H3

Cell Signaling Technologies – 9855S

Rabbit

1:50

O/N

4 °C

DAPI

NA

ThermoFisher

NA

1:100

15 min

RT

NOS2, direct conjugate (AlexaFluor-568)

EPR16635

AbCam – 209595

Rabbit

1:100

1 h or O/N

RT 4 °C

COX2, direct conjugate (AlexaFluor-488)

D5H5

Cell Signaling Technologies – 13596S

Rabbit

1:100

1 h or O/N

RT 4 °C

HIF1α, direct conjugate (AlexaFluor-647)

EPR16897

AbCam – 208420

Rabbit

1:100

O/N

4 °C

ATP5A1 (Mitochondrial ATPase, Primary)

NA

AbClonal – A5884

Rabbit

1:100

O/N

4 °C

(Anti-rabbit CF-640R secondary for ATPase)

NA

Biotium – 20178

Donkey

1:100

O/N

4 °C

α-Smooth Muscle Actin, direct conjugate (eFluor-488), eBioscience

1A4

ThermoFisher – 41-9760-82

Mouse

1:400

O/N

4 °C