Table 1 Evolutionary comparison of consensus TSS clusters between Bos taurus and Bos indicus subspecies in three adult tissues (spleen, liver, and muscle).
From: Evolution of tissue and developmental specificity of transcription start sites in Bos taurus indicus
Tissue | Number of consensus TSS clusters across subspecies | Number of consensus TSS clusters with at least 10 TPM expression level | Number of divergent TSSsa | Number of significant TSSs with differential usagea and shifting score >0.1 | |||
|---|---|---|---|---|---|---|---|
Total number | In promoter regions | Total number | In promoter regions | Total number | Significant (P-value < 0.05) | ||
Spleen | 17,361 | 10,844 | 7,254 | 5,795 | 50 | 1,174 | 71 |
Liver | 16,255 | 10,684 | 7,112 | 5,622 | 799 | 1,671 | 600 |
Muscle | 12,502 | 8,118 | 4,596 | 3,613 | 68 | 519 | 48 |
