Table 2 Structural parameters of nucleocapsids in the order of Mononegavirales.
From: Structural plasticity of mumps virus nucleocapsids with cryo-EM structures
Viruses | Nucleoproteins | Approach | Oligomeric states | Pitch (nm) | Twist | Resolution (Ã…) | EMDB | PDB |
|---|---|---|---|---|---|---|---|
MuV | Recombinant | Cryo-EM | Ring | n/a | −27.7° | 3.3 | 31361 | 7EWQ |
n/a | −25.7° | 6.2 | 30281 | 7EWQ | ||||
Helix | 5.3 | −27.1° | 3.9 | 31368 | 7EXA | |||
4.6 | −26.8° | 3.6 | 31369 | 7EXA | ||||
n/a | −27.7° | 3.7 | 31370 | 7EXA | ||||
Authentic | Cryo-EM | Helix | 6.7 | −28.3° | 18.1 | 2630 | n/a | |
NDV | Recombinant | Cryo-EM | Clam | 5.1 | −27.5° | 4.8 | 9793 | 6JC3 |
SeV | Recombinant | Negative stain EM | Helix | 5.3 6.8 37.5 | n/a | n/a | n/a | n/a |
Cryo-EM | Helix | 5.4 | −27.5° | 4.1 | 30066 | 6M7D | ||
5.6 | −27.4° | 4.6 | 30065 | 6M7D | ||||
5.3 | −27.6° | 2.9 | 30129 | 6M7D | ||||
Clam | 5.6 | −27.1° | 3.9 | 30064 | 6M7D | |||
NiV | Recombinant | X-ray | C1 | n/a | n/a | 2.5 | n/a | 4CO6 |
Cryo-EM | Clam | n/a | −27.9° | 4.3 | n/a | n/a | ||
PIV5 | Recombinant | X-ray | Ring | n/a | −27.7° | 3.1 | n/a | 4XJN |
RSV | Recombinant | X-ray | Ring | n/a | −36.0° | 3.3 | n/a | 2WJ8 |
MeV | Recombinant | Cryo-negative stain EM | Helix | 5 to 6.6 | −26.8° to –27.6° | n/a | n/a | n/a |
Cryo-EM | Helix | 4.9 | −29.2° | 4.3 | 2867 | 4UFT | ||
X-ray | Ring | n/a | n/a | 2.7 | n/a | 5E4V | ||
Authentic | Cryo-ET | Helix | 6.4 | n/a | n/a | 1973 | n/a |
