Table 3 Comparison of A (Musa acuminata), B (Musa balbisiana) and S (Musa schizocarpa) genomes assemblies.
From: Telomere-to-telomere gapless chromosomes of banana using nanopore sequencing
Musa acuminata | Musa balbisiana | Musa schizocarpa | |
|---|---|---|---|
Number of contigs | 124 | 3,787 | 379 |
Cumulative size | 484,058,756 | 491,421,783 | 517,486,196 |
N50 (bp) L50 | 32,091,396 7 | 1,801,976 59 | 6,493,909 24 |
N90 (bp) L90 | 6,704,534 16 | 56,360 578 | 1,047,001 84 |
Longest contig (bp) | 47,719,527 | 14,987,599 | 18,138,554 |
Number of chromosomes | 11 | 11 | 11 |
Cumulative size | 468,821,802 | 430,021,147 | 496,921,565 |
Cumulative size (ACGT only) | 468,133,046 | 429,290,714 | 490,105,212 |
% Anchored sequences | 96.8% | 87.3% | 94.7% |
N50 (bp) L50 | 43,931,232 5 | 42,323,520 5 | 46,993,692 5 |
N90 (bp) L90 | 34,826,100 10 | 30,518,812 10 | 36,762,080 10 |
Longest (bp) | 51,314,288 | 48,736,620 | 54,858,060 |
Number of gaps | 15 | 683 | 166 |
Estimated genome size | 523 Mb | 520 Mb | 587 Mb |
% of estimated genome size | 89.6% | 82.6% | 84.6% |
Number of annotated genes | 36,979 | 35,148 | 32,809 |
Complete BUSCO (N = 1,614) | 98.8% | 96.9% | 97.6% |
