Table 1 Summary statistics of the Shorea leprosula draft genome assembly.
Assembly features | Statistics |
---|---|
Estimated genome size | 402 Mb (by flow cytometry) 391 Mb (by k-mer distribution) |
Number of scaffolds | 2913 |
Scaffold N50 excluding gaps | 2.07 Mb |
Scaffold N50 including gaps | 2.58 Mb |
Longest scaffold excluding gaps | 8.15 Mb |
Number of contigs | 71,752 |
Contig N50 | 7.80 kb |
Assembly length excluding gaps | 340.50 Mb |
Assembly length including gaps | 449.70 Mb |
Transposable elements and repeat region percentage of assembly | 32.80% |
Predicted gene models | 60,563 |
Gene length (amino acids) | Mean: 350.28; median: 246 |
Annotated gene models (Theobroma cacao/Arabidopsis thaliana gene models) | 43,868 |
Unannotated gene models | 16,695 |