Table 3 Summary of 19 SNVs of F. prausnitzii.
Position | Gene order | REF-base | ALT-base | REF-codon | ALT-codon | REF-aa | ALT-aa | Type | Protein |
|---|---|---|---|---|---|---|---|---|---|
340649 | 340 | C | T | GAG | AAG | E | K | N | 30 S ribosomal protein S5 |
933317 | NA | G | A | — | — | — | — | — | NA |
936527 | 909 | A | G | GAT | GAC | D | D | S | Phosphohydrolase |
948824 | NA | A | G | — | — | — | — | — | NA |
1075051 | 1048 | T | C | GAU | GAC | D | D | S | Sensor histidine kinase KdpD |
1075054 | 1048 | G | A | GAG | GAA | E | E | S | Sensor histidine kinase KdpD |
2322761 | NA | G | A | — | — | — | — | — | NA |
2322857 | 2245 | C | A | GAG | GAU | E | D | N | Ferritin |
2330661 | 2256 | A | G | GGU | GGC | G | G | S | FprA family A-type flavoprotein |
2330741 | 2256 | G | T | CUC | AUC | L | I | N | FprA family A-type flavoprotein |
2335191 | 2263 | G | A | CAC | CAU | H | H | S | Nitroreductase family protein |
2335334 | 2263 | C | T | GCC | ACC | A | T | N | Nitroreductase family protein |
2335385 | 2263 | G | A | CGC | UGC | R | C | N | Nitroreductase family protein |
2336242 | 2264 | T | C | GCA | GCG | A | A | S | Ribonucleotide-diphosphate reductase subunitbeta |
2360360 | 2288 | T | C | AAC | AGC | N | S | N | Peptidase S24 |
2498766 | 2293 | C | T | GCU | ACU | A | T | N | Type II toxin-antitoxin system PemK/MazF family toxin |
2499857 | NA | T | G | — | — | — | — | — | NA |
2359643 | NA | A | C | — | — | — | — | — | NA |
2360322 | 2288 | C | T | GAA | AAA | E | K | N | Peptidase S24 |
