Fig. 5: Separability of ligands using individual ME-VAE features. | Communications Biology

Fig. 5: Separability of ligands using individual ME-VAE features.

From: A multi-encoder variational autoencoder controls multiple transformational features in single-cell image analysis

Fig. 5

Density function for several CYCIF and ME-VAE feature pairs. A two-sided ANOVA was performed for features and intensities between populations in order to compute the F statistic and p value (PR(>F)). Subsequently, the mean Tukey pairwise p value across ligands and mean effect size are shown for each feature. ME-VAE features used for comparison were the features with the largest correlation to the respective CYCIF marker. This analysis utilized all 73,134 cell images from the MCF10A dataset.

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