Table 2 Top SNPs (Pā<ā5Eā8) associated with serum copper levels in the GWAS meta-analysis.
Metals | SNP | CHR | POS (hg19) | Gene | Function | EA | NEA | EAF | FAMHES | MEWHC | Meta (fixed-effect) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
BETA | SE | P | N | BETA | SE | P | N | BETA | SE | P | N | Q | I2 | |||||||||
SCLs | rs671 | 12 | 112241766 | ALDH2 | exonic | A | G | 0.252 | ā0.226 | 0.038 | 4.52Eā09 | 1798 | ā0.157 | 0.062 | 1.15Eā02 | 685 | ā0.207 | 0.033 | 2.21Eā10 | 2483 | 0.350 | 0 |
| Ā | rs35691438 | 3 | 148940672 | CP(+0.84ākb) | upstream | C | T | 0.325 | 0.175 | 0.035 | 8.29Eā07 | 1798 | 0.225 | 0.064 | 4.65Eā04 | 685 | 0.187 | 0.031 | 1.63Eā09 | 2483 | 0.497 | 0 |