Fig. 1: Occurrence of SWI/SNF subunits in different eukaryotes. | Communications Biology

Fig. 1: Occurrence of SWI/SNF subunits in different eukaryotes.

From: Comprehensive identification of SWI/SNF complex subunits underpins deep eukaryotic ancestry and reveals new plant components

Fig. 1

Blue-filled circles indicate at least a positive hit for the search of a given component (rows) in specific species (columns). Light blue circles indicate the presence of a plausible or distant ortholog hit. Names for each subunit derive from consensus names (see Table 1). The presence of a given homolog was determined as described in Materials and Methods. Ancestral prediction indicates the most likely ancestor that contained a given subunit based on the presence in distinct lineages and species. *protozoan species are entitled together even though they do not form a natural group. The lower cladogram indicates phylogenetic relationships between species. LECA Last Eukaryotic Common Ancestor, LOCA Last Opisthokontan Common Ancestor, LMCA Last Metazoan Common Ancestor, H. sapiens Homo sapiens, M. musculus Mus musculus, D. rerio Danio (Brachydanio) rerio, S. purpuratus Strongylocentrotus purpuratus, D. melanogaster Drosophila melanogaster, C. elegans Caenorhabditis elegans, A. queenslandica Amphimedon queenslandica, S. pombe Schizosaccharomyces pombe, S. cerevisiae Saccharomyces cerevisiae, A. bisporus Agaricus bisporus, U. maydis Ustilago maydis, R. irregularis Rhizophagus irregularis, R. globosum Rhizoclosmatium globosum, D. discoideum Dictyostelium discoideum, T. brucei Trypanosoma brucei, A. thaliana Arabidopsis thaliana, S. lycopersicum Solanum lycopersicum, O. sativa Oryza sativa, A. trichopoda Amborella trichopoda, P taeda Pinus taeda, S. cucullata Salvinia cucullata, S. moellendorffii Selaginella moellendorffii, P. patens Physcomitrella (Physcomitrium) patens, S. fallax Sphagnum fallax, M. polymorpha Marchantia polymorpha, A. agrestis Anthoceros agrestis, M. endlicherianum Mesotaenium endlicherianum, C. braunii Chara braunii, K. nitens Klebsormidium nitens, C. atmophyticus Chlorokybus atmophyticus, M. viride Mesostigma viride, C. reindhardtii Chlamydomonas reindhardtii, C. subellipsoidea Coccomyxa subellipsoidea, O. tauri Ostreococcus tauri, C. paradoxa Cyanophora paradoxa, C. merolae Cyanidioschizon merolae.

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