Fig. 1: Pangenome analysis of St.LI reads mapping to the nearest reference genomes for K. pneumoniae, A. junii, and A. nosocomialis.
The outermost ring shows genome coverage for each pathogen. Ring two shows gene presence (color) and absence (gray). Ring three shows the depth of coverage across the reference genome in 1 kb windows. Ring four shows resistance gene locations with presence (color) and absence (gray). Ring five shows antibiotic resistance genes by type (gray labels are absent) with select genes labeled.
