Fig. 9: Global gene expression profile of engendered avian iPSCs with RNA-seq analysis.
From: Induced pluripotent stem cells of endangered avian species
a Workflow of the RNA-seq analysis. b Number of sequence reads for each sample obtained after aligning the chicken draft genome with CLC workbench. c Mapping ratio of each sample. Blue bars show reads mapped in pairs, red bars show reads mapped in broken pairs, and green bars show reads not mapped. d PCA with profiling of endangered avian and chicken iPSCs, endangered avian and chicken fibroblasts, and chicken embryo stage X. e Dendrogram and heat map analysis with profiling of endangered avian and chicken iPSCs, endangered avian and chicken fibroblasts, and chicken embryo stage X. f PCA analysis with profiling of chicken iPSCs (PB-TAD-7F), chicken fibroblasts, and chicken embryo stage X with SRP115012 (GEO: GSE102353). g PCA with profiling of chicken iPSCs (with PB-TAD-7F), chicken fibroblasts, and chicken embryo stage X with SRP087639 (GEO: GSE86592) and part of SRP115012 (GEO: GSE102353).
