Fig. 2: Pearson’s correlation on logarithmically-transformed prevalence ratios of SARS-CoV-2 variant of concern, variants of interest, and other lineages.
From: Dynamic SARS-CoV-2 emergence algorithm for rationally-designed logical next-generation vaccines
This figure demonstrates the quantitation of SARS-CoV-2 variants of concern, variants of interest, and other lineages. The emergence and disappearance of variants/lineages of SARS-CoV-2 is evaluated by Pearson’s correlation of logarithmic transformation prevalence data (n = 1,479,378 biologically independent samples). Variants are displayed in order of decreasing r value. Pearson’s correlation of logarithmic transformed prevalence versus time as a interval value for SARS-CoV-2 lineages a P.1, b B.1.617.2, c B.1.617.1, d B.1.351, e B.1.1.7, f B.1.429, g B.1.427, h B.1.525, i P.2, j B.1.243, k B.1.1.298, and l B.1.1. Graphs were generated using open-source RStudio version 1.3.1093 (R version 4.0.3) and the ggplot2 package under MIT + license (https://cran.r-project.org/web/packages/ggplot2/index.html). Graphs were compiled and the final figure created using Biorender.com.
