Table 2 Genetic diversity among eight geese populations.

From: Chromosome-level genome and population genomics reveal evolutionary characteristics and conservation status of Chinese indigenous geese

Breed

Number

NSNP

Ho

He

F

DST

FROH(%)

R2(0.3)(kb)

ACy

5

5,245,562

0.24

0.24

0.03 ± 0.04

0.23 ± 0.01

6.20 ± 4.24

0.77

XGG

768

4,996,204

0.28

0.28

0.06 ± 0.04

0.24 ± 0.01

10.99 ± 3.07

1.45

FCG

51

4,904,489

0.25

0.27

0.09 ± 0.04

0.23 ± 0.01

10.27 ± 2.69

0.84

GFW

50

4,815,415

0.25

0.26

0.11 ± 0.03

0.23 ± 0.01

10.09 ± 2.62

1.21

LHW

11

4,685,880

0.22

0.26

0.23 ± 0.18

0.04 ± 0.02

16.30 ± 16.6

1.63

LXW

50

4,708,718

0.24

0.26

0.13 ± 0.03

0.25 ± 0.01

10.09 ± 2.67

1.33

AAn

5

1,703,829

0.11

0.10

0.52 ± 0.35

0.09 ± 0.04

8.43 ± 4.44

1.89

LDG

50

828,686

0.05

0.05

0.78 ± 0.02

0.16 ± 0.01

26.88 ± 2.37

7.01

  1. ACy Anser cygnoides; XGG Xingguo gray goose, FCG Fengcheng gray goose, GFW Guangfeng white goose, LHW Lianhua white goose, LXW Lingxian white goose, AAn Anser anser, LDG Landaise goose, NSNP the number of polymorphic snp, Ho observed heterozygosity, He expected heterozygosity, F inbreeding coefficient, DST intraspecific genetic distance, FROH the proportion of homozygous fragments, r2(0.3), the decay distance when the linkage disequilibrium is 0.3; ×value indicates standard errors.
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