Fig. 3: Trajectory analysis of fibroblasts and myofibroblasts in human colonic mucosa.
From: An integrated map of fibroblastic populations in human colon mucosa and cancer tissues
a Monocle trajectories of fibroblasts from normal mucosa. Cells are colored by Monocle state (left) and pseudotime (right). b Heatmap showing the dynamic changes in pseudotime-dependent transcription factors over pseudotime. c Feature plots of the expression distribution for selected transcription factors across pseudotime. d The stacked bar chart shows the percentage of fibroblasts from distinct clusters across the pseudotime states. e Plots of the minimum spanning tree on cells, split by cluster.
