Fig. 3: Gene set enrichment analysis of insulin and estrogen pathways. | Communications Biology

Fig. 3: Gene set enrichment analysis of insulin and estrogen pathways.

From: Spaceflight induces changes in gene expression profiles linked to insulin and estrogen

Fig. 3

a A heatmap of the normalized enrichment scores (NES) of estrogen and insulin pathways impacted by spaceflight in datasets of RR-1 mission samples. The dark gray locations in the heatmap indicate missing values for the NES, resulting from off-range adjusted p-values (padj) at which the NES is obtained. The assumed range is padj < 0.3. A positive NES indicates activation of the pathways, while at negative NES the pathway is inhibited. In the pathways, the full meaning of CRGS is ‘Cellular Response to Glucose Stimulus’; and the full meaning of IERSP is ‘Intracellular Estrogen Receptor Signaling Pathway’. The pathways are categorized into several types, and the MSigDB database from which the pathway is sourced is indicated in parentheses. b A heatmap of the t-score of the overlapping leading-edge pathway genes across the datasets of the RR-1 mission samples. The dark gray locations in the heatmap indicate the absence of a value for the t-score, resulting from off-range adjusted p-values (padj) at which the t-score is obtained. The assumed range is padj < 0.05. The leading-edge genes are the genes that contribute to the GSEA predicted pathways. The overlapping leading-edge genes are commonly leading-edge genes to at least four of the datasets.

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