Fig. 5: Positive and negative interaction of type II methyltransferases with motif patterns.
From: Methylome evolution suggests lineage-dependent selection in the gastric pathogen Helicobacter pylori
The interactions between methyltransferases and motifs were estimated using a generalized linear model with a quasibinomial distribution and a logit link function. A 95% confidence interval is indicated by a gray ribbon. Goodness-of-it was assessed using a chi-square test (p < 0.05). Pseudo-R2 (McFadden) was calculated using the ratio of residual deviance over the null deviance and is indicated on the plots.
