Table 1 Reference panel data resource.
Dataset | Tissue | samples | Ancestry | Updated year | PMID | Link |
---|---|---|---|---|---|---|
GTEx | 54 tissues | 15,201 | White, AA, AS, Others | 2019 | 32913098 | |
TCGA | 67 tissues | 8094 | White, AA, AS, NA, Others | 2021 | - | https://portal.gdc.cancer.gov/;models available in http://gusevlab.org/projects/fusion/ |
DGN | Whole Blood | 922 | EU | 2014 | 24092820 | |
METSIM | Adipose, Blood | 563 | Fins | 2010 | 28119442 | models available in http://gusevlab.org/projects/fusion/ |
NTR | Blood | 5339 | Netherlands | 2014 | 20477721 | |
YFS | Blood | 1264 | Fins | 2011 | 29985430 | models available in http://gusevlab.org/projects/fusion/ |
CMC | Brain (DLPFC) | 452 | CAU, AA, Hispanic, EA | 2021 | 27668389 | |
eQTLGen Consortium | Blood, PBMC | 31,684 | EU, Others | 2020 | 34475573 | |
GEU | LCL | 462 | CEU, Fins, Others | 2012 | 24037378 | https://www.ebi.ac.uk/biostudies/arrayexpress/studies/E-GEUV-1?query=E-GEUV-1 |
BrainSeq | Brain (DLPFC) | 175 | CAU | 2015 | 26687217 | |
ROS/MAP | Brain (DLPFC) | 2091 | AA, Hispanic, Others | 2020 | 22471860; 22471867 | |
AD Knowledge Portal | Brain, Blood | 2573 | - | 2022 | 33085189 | |
PsychENCODE | Brain | 2198 | - | 2015 | 26605881 |