Fig. 2: DENV-2 NS2B/NS3proS135A amide backbone, 15N(H), dynamic parameters of the NS3proS135A and co factor NS2B obtained on 600 MHz spectrometers. | Communications Biology

Fig. 2: DENV-2 NS2B/NS3proS135A amide backbone, 15N(H), dynamic parameters of the NS3proS135A and co factor NS2B obtained on 600 MHz spectrometers.

From: Combined NMR and molecular dynamics conformational filter identifies unambiguously dynamic ensembles of Dengue protease NS2B/NS3pro

Fig. 2

The relaxation parameters for the NS3proS135A (ac) and NS2B (df) are presented according to the following: Longitudinal relaxation rate R1(s−1) for NS3proS135A and NS2B are presented in (a) and (d), respectively. The transverse relaxation time R2(s−1) for NS3proS135A (and NS2B are presented in (b) and (e). Heteronuclear 1H−15N NOE values for NS3proS135A and NS2B are shown in (c) and (f). The experimentally obtained R1(s−1), R2(s−1) and NOE values are presented by grey solid brackets. The theoretically predicted dynamic parameters R1, R2 and NOE, obtained through five trajectories, are displayed by solid lines and coloured in green, light blue, red, dark blue and dashed black for ensembles I, II, III, IV and V, respectively. NS2B regions corresponding to residues 72-95 are extended in boxes shown with red point lines within (df). The theoretical profiles of relaxation rates simulated as a function of overall correlation tumbling τc, internal motion τe and amplitude S2 are presented in the right panels of NS2B. The error bars of the experimental data are one σ from the curve fitting and for the predicted parameters from the bootstrapping analysis.

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