Table 2 X-ray analysis statistics for MtGS.
MtGS-apo-TbXo4 | MtGS-apo without TbXo4 | MtGS- 2OG/Mg2+/ATP | MtGS-2OG/Mg2+ | |
---|---|---|---|---|
Data collection | ||||
Wavelength (Å) | 0.97625 | 1.00004 | 1.30511 | 0.99999 |
Space group | C2221 | C2221 | P1 | P1 |
Resolution (Å) | 49.78 – 1.65 (1.74 – 1.65) | 76.67 - 2.43 (2.57 - 2.43) | 110.03 – 2.15 (2.30 – 2.15) | 203.54 – 2.91 (3.12 – 2.91) |
Cell dimensions | ||||
a, b, c (Å) | 131.43, 228.45, 204.80 | 132.65, 230.24, 205.59 | 112.34, 131.77, 131.51 | 131.81, 131.93, 203.54 |
α, β, γ (°) | 90, 90, 90 | 90, 90, 90 | 60.04, 87.72, 67.34 | 89.95, 89.86, 60.05 |
Rmerge(%)a | 6.3 (91.8) | 26.9 (179.5) | 11.0 (95.0) | 12.2 (50.1) |
Rpim (%)a | 3.9 (56.6) | 7.3 (46.4) | 6.8 (59.0) | 7.6 (34.4) |
CC1/2 a | 0.999 (0.782) | 0.998 (0.782) | 0.995 (0.569) | 0.993 (0.548) |
I/σIa | 11.9 (1.6) | 7.4 (1.5) | 9.3 (1.3) | 5.9 (1.6) |
Spherical completenessa | 98.9 (97.9) | 86.6 (28.7) | 76.9 (21.1) | 64.8 (16.8) |
Ellipsoidal completenessa | / | 93.3 (49.5) | 92.2 (58.8) | 91.7 (69.3) |
Redundancya | 6.9 (6.9) | 14.5 (15.6) | 3.6 (3.4) | 3.5 (3.0) |
Nr. unique reflectionsa | 361,584 (51,999) | 102,291 (5,117) | 248,419 (12,420) | 169,224 (8,461) |
Refinement | ||||
Resolution (Å) | 49.78 – 1.65 | 58.89 – 2.43 | 42.88 – 2.15 | 43.74 – 2.91 |
Number of reflections | 361,148 | 102,286 | 248,376 | 169,113 |
Rwork/Rfreeb (%) | 16.30/18.50 | 22.94/26.82 | 17.10/20.20d | 25.41/27.80 |
Number of atoms | ||||
Protein | 21,321 | 21,082 | 42,408 | 84,792 |
Ligands/ions | 81 | 154 | 710 | 371 |
Solvent | 2,932 | 293 | 3,041 | 0 |
Mean B-value (Å2) | 33.52 | 52.65 | 38.36 | 63.17 |
Molprobity clash score | 2.32 | 4.01 | 1.99 | 1.09 |
Ramachandran plot | ||||
Favored regions (%) | 98.20 | 96.51 | 97.92 | 96.26 |
Outlier regions (%) | 0 | 0.04 | 0.22 | 0.24 |
rmsdc bond lengths (Å) | 0.012 | 0.004 | 0.009 | 0.010 |
rmsdc bond angles (°) | 1.485 | 0.654 | 0.93 | 1.274 |
PDB ID code | 8OOL | 8OON | 8OOO | 8OOQ |