Fig. 2: Haplotype analysis of the OsDIL1 gene associated with the trait across the subset panel.

A Haplotypic variation in the OsDIL1 gene associated with single plant yield trait (SPY) in the subset panel. B Phenotypic evaluation of the subset panel (n = 399) in field conditions under non-stress and drought stress conditions. C Violin plot showing variation in SPY trait in rice accessions significant at p-value < 0.05. Different alphabets denote significant differences between haplotypes. The median is depicted by the horizontal line in the box. Note: Haplotype variation reflects only those haplotypes that are used in haplo-pheno analyses. The violin plot uses an orange color to depict the distribution of the superior haplotype, while the green color is employed to represent the distribution of the remaining haplotypes associated with the OsDIL1 gene.