Table 1 Features of genome assemblies of four selected phyllosphere lactic acid bacteria isolated from alfalfa.

From: Characterization of phyllosphere endophytic lactic acid bacteria reveals a potential novel route to enhance silage fermentation quality

 

EP2

EP3

EN5

EN6

Species

Lactococcus lactis

Lactiplantibacillus pentosus

Pediococcus pentosaceus

Lactiplantibacillus plantarum

Genome size (bp)

2,348,459

3,582,264

1,843,636

3,290,693

Contig N50 (bp)

2,348,459

3,556,640

1,802,413

3,290,693

Plasmid (bp)

None

25,624

41,223

None

Genes Number

2211

3172

1785

3092

Total length (bp)

2,023,869

2,868,987

1,622,142

2,760,264

Average gene length (bp)

915

904

908

892

Max gene length (bp)

6528

11,973

6021

8697

Min gene length (bp)

93

90

90

90

Repetitive sequence content (%)

0.29

0.12

0.2

0.11

GC content (%)

35.03

46.37

37.35

44.44

MFS gene number

23

56

18

43

ABC gene number

142

201

81

180

PTS gene number

19

62

21

55

Transport protein number

580

823

459

778

  1. EP2 epiphytic L. lactis, EP3 epiphytic L. pentosus, EN5 endophytic P. pentosaceus, EN6 endophytic L. plantarum. MFS major facilitator superfamily, ABC ATP-binding cassette superfamily, PTS phosphotransferase system.
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