Fig. 1: Determination of the role of Poly-D/E regions on BCOR binding to KDM2B. | Communications Biology

Fig. 1: Determination of the role of Poly-D/E regions on BCOR binding to KDM2B.

From: Calcium modulates the tethering of BCOR-PRC1.1 enzymatic core to KDM2B via liquid-liquid phase separation

Fig. 1

A Schematic representation of the domain architecture of BCOR. Three Poly-D/E regions on linker are highlighted with light red for Poly-D/E1st, red for Poly-D/E2nd, and dark red for Poly-D/E3rd. B Truncations of BCOR used in this study. C Binding affinity between BCORANK-linker and KDM2BF-box-LRRs/SKP1 was measured by ITC with buffer containing 50 mM or 150 mM NaCl. D Binding affinity measurement between dimer of PCGF1RAWUL/indicated BCOR truncation and the KDM2BF-box-LRRs/SKP1 dimer using ITC with buffer containing 150 mM NaCl. N/D: Cannot be determined. For (C, D), The Kd values are shown as mean ± SD for triplicate experiments. E The importance of Poly-D/E regions on the linker of BCOR binding to KDM2B/SKP1 is assessed using Co-IP assay. Expressing plasmids for BCOR (wild or mutant), PCGF1, KDM2B or SKP1, were co-transfected into HEK293T cells. Co-IP was performed with anti-Flag magnetic beads, after 48 h transfection. The western-blotting data is representative of three independent experiments. F Relative level of KDM2B-HA or PCGF1-strep protein co-purified with BCOR-Flag as shown in (E). Data are represented as mean ± SD for triplicate experiments.

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