Table 1 Average concentrations and lengths of obtained genomic DNA samples
From: Cross-comparison of gut metagenomic profiling strategies
The average of DNA concentration isolated from dog stool | Average gDNA cc. (ng/µl) |
Qiagen | 1.815 ± 0.464 |
Invitrogen | 14.6 ± 4.35 |
Macherey-Nagel | 24.0 ± 4.83 |
Zymo Research | 12.4 ± 1.36 ng/µL |
The average of DNA concentration isolated from the MCS sample | Average gDNA cc. (ng/µl) |
Qiagen | 0.364 ± 0.12 |
Invitrogen | 0.287 ± 0.048 |
Macherey-Nagel | 10.564 ± 0.91 |
Zymo Research | 38.72 ± 3.33 |
The average of DNA concentration isolated from the GMS sample | Average gDNA cc. (ng/µl) |
Qiagen | 1.146 ± 0.157 |
Invitrogen | 0.0683 ± 0.0076 |
Macherey-Nagel | 12.25 ± 0.636 |
Zymo Research | 4.087 ± 0.31 |
The average of the longest DNA fragments isolated from dog stool | Average length of DNA (bp) |
Qiagen | 9361 |
Invitrogen | 26,341 |
Macherey-Nagel | 21,325 |
Zymo Research | 33,867 |
The average of the longest DNA fragments isolated from the MCS sample | Average length of DNA (bp) |
Qiagen | >60,000 |
Invitrogen | >60,000 |
Macherey-Nagel | 54,740 |
Zymo Research | >60000 |
The average of the longest DNA fragments isolated from the GMS sample | Average length of DNA (bp) |
Qiagen | >60,000 |
Invitrogen | 58,897 |
Macherey-Nagel | 55,538 |
Zymo Research | >60,000 |
