Table 1 Differentially abundant DNA fragments mapping to their corresponding genes
Entrez gene ID | Base mean | Fold change | log2 fold change | lfcSE | p value | p adj | Gene name |
---|---|---|---|---|---|---|---|
51305 | 52.5293 | 5.356389 | 2.519976 | 0.470462 | 8.49E-08 | 0.000298 | potassium two pore domain channel subfamily K member 9(KCNK9) |
340385 | 40.83501 | 4.19331 | 2.274789 | 0.542481 | 2.75E-05 | 0.017206 | zinc finger protein 517(ZNF517) |
79792 | 44.5353 | 4.876449 | 2.206439 | 0.452468 | 1.08E-06 | 0.001686 | gasdermin D(GSDMD) |
203054 | 43.64905 | 4.054393 | 2.10785 | 0.519893 | 5.03E-05 | 0.023628 | aarF domain containing kinase 5(ADCK5) |
286102 | 35.9425 | 4.055266 | 2.076666 | 0.512091 | 5.01E-05 | 0.023628 | transmembrane p24 trafficking protein 10 pseudogene 1(TMED10P1) |
203062 | 93.95212 | 5.727662 | 2.061427 | 0.359907 | 1.02E-08 | 4.77E-05 | t-SNARE domain containing 1(TSNARE1) |
51059 | 123.5015 | 6.111224 | 1.942543 | 0.317865 | 9.89E-10 | 1.39E-05 | family with sequence similarity 135 member B(FAM135B) |
57713 | 94.51126 | 4.404351 | 1.924556 | 0.436967 | 1.06E-05 | 0.009523 | Scm like with four mbt domains 2(SFMBT2) |
2765 | 32.24195 | 3.843083 | 1.84521 | 0.480138 | 0.000121 | 0.03969 | glycosylphosphatidylinositol anchored molecule like(GML) |
90990 | 51.15059 | 4.054229 | 1.839221 | 0.453655 | 5.03E-05 | 0.023628 | kinesin family member C2(KIFC2) |
340390 | 73.73653 | 4.396036 | 1.828317 | 0.415901 | 1.10E-05 | 0.009523 | WD repeat domain 97(WDR97) |
7587 | 54.95983 | 4.103096 | 1.820575 | 0.443708 | 4.08E-05 | 0.022905 | zinc finger protein 37A(ZNF37A) |
169044 | 217.9104 | 5.959427 | 1.80555 | 0.302974 | 2.53E-09 | 1.78E-05 | collagen type XXII alpha 1 chain(COL22A1) |
389690 | 96.78981 | 4.950125 | 1.796476 | 0.362915 | 7.42E-07 | 0.001488 | maestro heat like repeat family member 5 (gene/pseudogene)(MROH5) |
575 | 98.13776 | 4.229418 | 1.760145 | 0.416167 | 2.34E-05 | 0.016868 | adhesion G protein-coupled receptor B1(ADGRB1) |
57623 | 92.20973 | 5.256394 | 1.751295 | 0.333174 | 1.47E-07 | 0.000413 | zinc finger and AT-hook domain containing(ZFAT) |
23513 | 94.37445 | 4.565079 | 1.727285 | 0.378369 | 4.99E-06 | 0.005828 | scribble planar cell polarity protein(SCRIB) |
8629 | 97.41843 | 5.18646 | 1.713219 | 0.330325 | 2.14E-07 | 0.000502 | Jrk helix-turn-helix protein(JRK) |
10656 | 50.00904 | 4.018281 | 1.68615 | 0.41962 | 5.86E-05 | 0.026564 | KH RNA binding domain containing, signal transduction associated 3(KHDRBS3) |
11156 | 50.81729 | 3.864983 | 1.674666 | 0.433292 | 0.000111 | 0.038063 | protein tyrosine phosphatase 4A3(PTP4A3) |
727957 | 157.3975 | 4.548848 | 1.674413 | 0.368096 | 5.39E-06 | 0.005828 | maestro heat like repeat family member 1(MROH1) |
66004 | 58.00909 | 3.971569 | 1.667592 | 0.419882 | 7.14E-05 | 0.030669 | Ly6/neurotoxin 1(LYNX1) |
286077 | 81.26694 | 4.053481 | 1.632136 | 0.402651 | 5.05E-05 | 0.023628 | family with sequence similarity 83 member H(FAM83H) |
9831 | 48.19577 | 4.093406 | 1.6065 | 0.392461 | 4.25E-05 | 0.022966 | zinc finger protein 623(ZNF623) |
114822 | 71.65165 | 4.223848 | 1.589839 | 0.376396 | 2.40E-05 | 0.016868 | rhophilin Rho GTPase binding protein 1(RHPN1) |
340371 | 62.80066 | 3.909885 | 1.577613 | 0.403493 | 9.23E-05 | 0.032428 | nuclear receptor binding protein 2(NRBP2) |
90987 | 57.30882 | 3.956916 | 1.577231 | 0.398601 | 7.59E-05 | 0.030669 | zinc finger protein 251(ZNF251) |
83696 | 125.1061 | 4.89394 | 1.548243 | 0.316359 | 9.88E-07 | 0.001686 | trafficking protein particle complex subunit 9(TRAPPC9) |
9401 | 49.10256 | 3.831467 | 1.542665 | 0.402631 | 0.000127 | 0.040667 | RecQ like helicase 4(RECQL4) |
4796 | 76.4573 | 4.453242 | 1.533215 | 0.344292 | 8.46E-06 | 0.008487 | tonsoku like, DNA repair protein(TONSL) |
7553 | 62.97017 | 4.187755 | 1.527551 | 0.364766 | 2.82E-05 | 0.017206 | zinc finger protein 7(ZNF7) |
83481 | 154.6704 | 3.964448 | 1.512488 | 0.381513 | 7.36E-05 | 0.030669 | epiplakin 1(EPPK1) |
27161 | 189.1098 | 4.648852 | 1.509881 | 0.324786 | 3.34E-06 | 0.004262 | argonaute RISC catalytic component 2(AGO2) |
348645 | 106.8914 | 4.678868 | 1.506052 | 0.321884 | 2.88E-06 | 0.004052 | MIR3667 host gene(MIR3667HG) |
286101 | 58.56147 | 4.108216 | 1.469352 | 0.357662 | 3.99E-05 | 0.022905 | zinc finger protein 252, pseudogene(ZNF252P) |
5339 | 206.222 | 4.386394 | 1.465785 | 0.334166 | 1.15E-05 | 0.009523 | plectin(PLEC) |
80728 | 82.81046 | 3.912744 | 1.45889 | 0.372856 | 9.13E-05 | 0.032428 | Rho GTPase activating protein 39(ARHGAP39) |
286075 | 56.63698 | 3.955367 | 1.458306 | 0.36869 | 7.64E-05 | 0.030669 | zinc finger protein 707(ZNF707) |
50626 | 69.84278 | 3.938497 | 1.416377 | 0.359624 | 8.20E-05 | 0.031993 | zinc finger TRAF-type containing 1(ZFTRAF1) |
5747 | 149.4065 | 3.924691 | 1.369411 | 0.348922 | 8.68E-05 | 0.032428 | protein tyrosine kinase 2(PTK2) |
22898 | 130.743 | 4.194187 | 1.346491 | 0.321037 | 2.74E-05 | 0.017206 | DENN domain containing 3(DENND3) |
58500 | 83.49485 | 3.918417 | 1.183341 | 0.301995 | 8.91E-05 | 0.032428 | zinc finger protein 250(ZNF250) |
10071 | 320.1541 | 4.289752 | 0.983784 | 0.229333 | 1.79E-05 | 0.013959 | mucin 12, cell surface associated(MUC12) |
286410 | 97.42421 | -3.84638 | −1.05959 | 0.275479 | 0.00012 | 0.03969 | ATPase phospholipid transporting 11 C(ATP11C) |