Table 2 Single-cell sequencing datasets

From: Metabolic modeling elucidates phenformin and atpenin A5 as broad-spectrum antiviral drugs against RNA viruses

Dataset

Reference

Accession Number

Celltype annotation source

# CS models

BALF1

26

GSE145926

Annotation via CHETAH version 1.8.0 with single cell lung atlas (GSE13683186)

1678

BALF2

22

EGAS00001004481

Original authors (https://doi.org/10.6084/m9.figshare.12436517)

148,420

CALU-3

27

GSE148729

Single cell experiment

32,003

scH1299

27

GSE148729

Single cell experiment

20,604

Influenza H1N1

28

GSE191176

Manual annotation following methods of original publication

3066

Dengue

30

GSE116672

Annotation via CHETAH version 1.8.0 with PBMC single cell reference55

64,638

  1. The last column indicates the number of context-specific models reconstructed from each dataset.
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