Table 1 Top abundance viral taxa with contig counts

From: Distinct virome compositions and lack of viral diversification indicate that viral spillover is a dead-end between the western honey bee and the common eastern bumblebee

Type

Virus group

Virus

Common names

Total num. Contigs, Apis

Total num. Contigs, Bombus

DNA virus

Apis mellifera filamentous virus

Apis mellifera filamentous virus

AmFV

5

0

Monodnaviria; Shotokuvirae; Cossaviricota; Quintoviricetes; Piccovirales; Parvoviridae

Bombus cryptarum densovirus

 

0

1

Hemipteran scindoambidensovirus 1

 

11

7

unclassified densovirus

 

6

12

Varidnaviria; Bamfordvirae; Nucleocytoviricota

unclassified nucleocytoviricota

 

1

5

RNA virus

Negevirus

andrena haemorrhoa nege-like virus (AHNV)

 

181

287 (76)

Riboviria; Orthornavirae; Kitrinoviricota; Alsuviricetes; Martellivirales; Virgaviridae

allermuir hill virus 1 (AHV1)

 

23

40 (1)

bombus-associated virus vir4 (BVV4)

 

29

32

Riboviria; Orthornavirae; Kitrinoviricota; Magsaviricetes; Nodamuvirales; Sinhaliviridae

lake sinai virus (LSV)

LSV

77 (24)

11 (6)

Lake Sinai virus 1 (LSV1)

17 (8)

1

Lake Sinai virus 2 (LSV2)

42 (8)

3

unclassified sinaivirus (US)

27 (11)

4 (3)

Riboviria; Orthornavirae; Negarnaviricota; Ellioviricetes; Bunyavirales; Phasmaviridae

ganda orthophasmavirus (GO)

 

8

17

unclassified phasmaviridae (UP)

 

123

124 (16)

Riboviria; Orthornavirae; Negarnaviricota; Monjiviricetes; Mononegavirales; Rhabdoviridae

apis rhabdovirus 1 (AR1)

 

55 (1)

1

Riboviria; Orthornavirae; Pisuviricota; Duplopiviricetes; Durnavirales; Partitiviridae

hubei partiti-like virus 34 (HPV34)

 

40

2

vespa velutina partiti-like virus 2 (VVPV2)

 

7

0

Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales

mayfield virus 1 (MV1)

 

0

10 (5)

Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Dicistroviridae

Aparavirus apisacutum (AA)

ABPV

147 (46)

0

Cripavirus mortiferum (CM)

 

6 (2)

2

Cripavirus ropadi (CR)

 

11

0

Triatovirus nigereginacellulae (TN)

BQCV

254 (21)

70

Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes; Picornavirales; Iflaviridae

bactrocera tryoni iflavirus 1 (BTI1)

 

2

66 (39)

Iflavirus aladeformis (IA)

DWV

492 (33)

86 (3)

Iflavirus sacbroodi (IS)

SBV

1039 (105)

378 (262)

  1. Putative complete genome numbers for the RNA viruses shown in parentheses (absent where it is 0), including only contigs > 1500 bp in length and with checkV quality of medium, high, or complete.
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