Table 3 DRAMs detected in RT/PR/IN using Next Generation Sequencing (NGS)

From: Unique molecular signatures in rebound viruses from antiretroviral drug and CRISPR-treated HIV-1-infected humanized mice

Mutations

Sample ID and (Group)

Classification

Summary

E138EK

Frequency: E: 97%, K: 3.1%, Coverage:27,891

3169 (LA ART Group)

NNRTI Mutations

A mutation selected in a high proportion of persons receiving RPV. It reduces RPV susceptibility 2 to 3-fold. In combination with K101E or M184I, it is sufficient to cause VF on a first-line RPV-containing regimen.

H221HY

Frequency: H: 96%, Y: 4.1%

Coverage:27,941

3169 (LA ART Group)

NNRTI Accessory

Mutations

An accessory mutation selected primarily by NVP, RPV, and DOR

K101KER

Frequency: K: 73%,

E: 14%,

R: 13%

Coverage: 33,086

3181 (LA ART Group)

NNRTI Accessory

Mutations

An accessory mutation that confers intermediate resistance to NVP and RPV

This virus is predicted to have intermediate-level reduced susceptibility to RPV.

V75VI

Frequency: V: 94%,

I: 5.1%

Coverage: 26,696

3182 (LA ART Group)

NRTI Accessory

Mutations

An accessory mutation that often occurs in combination with the multi-NRTI resistance mutation Q151M. When it occurs alone, its clinical significance is uncertain.