Fig. 1: Comprehensive OxyR regulon in P. aeruginosa. | Communications Biology

Fig. 1: Comprehensive OxyR regulon in P. aeruginosa.

From: Systems-level exploitation of OxyR regulon unravels a potential antibacterial target in Pseudomonas aeruginosa

Fig. 1

A Functional classification of P. aeruginosa OxyR regulon under hypoxia condition. Functional classes were obtained from www.pseudomonas.com82. Two groups of values (promoted genes and repressed genes in the oxyR mutant) were chosen and compared. Values indicate the number of oxyR-controlled genes within the respective classes. B qRT-PCR validation of the microarray data. Randomly selected genes from were checked with quantitative real-time PCR analysis as described in Materials and Methods. All data were obtained from at least two independent experiments with at least three replicates. C Mean log2 ratios of the qRT-PCR data are plotted against the mean log2 ratios of the RNA-seq data.

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