Table 1 Comparison of bond length and bond angle between experimental PDB and DynaRNA-generated conformation ensembles

From: DynaRNA: accurate dynamic RNA conformation ensemble generation with diffusion model

 

C5′–C4′

C3′–C4′

C4′–O4′

C5′–C4′–C3′

C5′–C4′–O4′

C3′–C4′–O4′

PDB

1.478 Å

1.512 Å

1.467 Å

113.57°

111.12°

104.05°

DynaRNA

1.509 Å

1.520 Å

1.450 Å

115.73°

109.80°

104.29°

MAE

0.031 Å

0.008 Å

0.017 Å

2.16°

1.32°

0.24°