Table 1 Optimized LJ parameters for various LJ typing models. ε: kcal mol−1, r1/2: Å. See the text for details.
From: Data-driven analysis of the number of Lennard–Jones types needed in a force field
HCON | HCO3N | H2CON | H2CO3N | H2CO3Nreopt | ||||||
---|---|---|---|---|---|---|---|---|---|---|
SMIRKS | ε | r1/2 | ε | r1/2 | ε | r1/2 | ε | r1/2 | ε | r1/2 |
Hydrogen | ||||||||||
[#1:1]-[#6X4] | 0.017 | 1.27 | 0.034 | 1.42 | 0.014 | 1.39 | 0.023 | 1.42 | 0.030 | 1.42 |
[#1:1]-[#6X3] | 0.017 | 1.27 | 0.034 | 1.42 | 0.014 | 1.39 | 0.023 | 1.42 | 0.030 | 1.42 |
[#1:1]-[#7] | 0.017 | 1.27 | 0.034 | 1.42 | 0.015 | 0.69 | 0.007 | 0.88 | 0.031 | 1.44 |
[#1:1]-[#8] | 0.017 | 1.27 | 0.034 | 1.42 | 0.015 | 0.69 | 0.007 | 0.88 | 0.031 | 1.44 |
Carbon | ||||||||||
[#6:1] | 0.074 | 2.11 | 0.077 | 1.84 | 0.081 | 2.06 | 0.078 | 1.96 | 0.078 | 1.87 |
[#6X4:1] | 0.074 | 2.11 | 0.077 | 1.84 | 0.081 | 2.06 | 0.078 | 1.96 | 0.078 | 1.87 |
[#6X2:1] | 0.074 | 2.11 | 0.077 | 1.84 | 0.081 | 2.06 | 0.078 | 1.96 | 0.078 | 1.87 |
Nitrogen | ||||||||||
[#7X3:1] | 0.194 | 1.47 | 0.231 | 1.79 | 0.177 | 1.80 | 0.210 | 1.83 | 0.245 | 1.78 |
[#7:1] | 0.194 | 1.47 | 0.231 | 1.79 | 0.177 | 1.80 | 0.210 | 1.83 | 0.245 | 1.78 |
Oxygen | ||||||||||
[#8:1] | 0.220 | 1.11 | 0.137 | 1.73 | 0.205 | 1.61 | 0.197 | 1.71 | 0.100 | 1.65 |
[#8X2H1 + 0:1] | 0.220 | 1.11 | 0.494 | 1.89 | 0.205 | 1.61 | 0.218 | 1.60 | 0.533 | 1.87 |
[#8X2H0 + 0:1] | 0.220 | 1.11 | 0.087 | 1.82 | 0.205 | 1.61 | 0.151 | 1.59 | 0.096 | 1.82 |