Table 1 Strains and plasmids used in this study

From: Engineering of acyl ligase domain in non-ribosomal peptide synthetases to change fatty acid moieties of lipopeptides

Strain or plasmid

Genotype or description

Reference or source

Escherichia coli

 E. coli JM109

recA1, endA1, gyrA96, thi-1, hsdR17(rK mK+), e14 (mcrA), supE44, relA1, Δ(lac-proAB)/F’ [traD36, proAB+, lac Iq, lacZΔM15]

Takara Bio Inc.

 E. coli BL21-AI

F, ompT, hsdSB (rB mB), gal, dcm, araB::T7RNAP-tetA

Thermo Fisher Scientific

Bacillus subtilis

 B. subtilis 168

trpC2

Lab stock

 B. subtilis ATCC6633

Wild-type (NBRC 3134)

NITE Biological Resource Center

 B. subtilis RB14

Wild-type

45, 50

 KB04

ΔppsABCDE::fenF-mycA-mycB-mycC-kan, sfp::lpa-14-cat

40

 BL043

ΔppsABCDE::erm-PrplGB-fenF-mycA-mycB-mycC-kan, sfp::lpa-14-cat

This work

 BL063

BL043 ΔsigF

This work

 BL082

BL063 ΔmycAL-mycACP::pheS*-spec

This work

 BL123

BL063 ΔmycAL::ituAL

This work

 BL134

BL063 ΔmycACP::ituACP

This work

 BL135

BL063 ΔmycAL-mycACP::ituAL-ituACP

This work

 BL136

BL063 ΔmycAL::chimaeric AL domain 1 (region 1 derived from mycAL and regions 2, 3, 4, and 5 derived from ituAL)

This work

 BL137

BL063 ΔmycAL::chimaeric AL domain 2 (regions 1 and 2 derived from mycAL and regions 3, 4, and 5 derived from ituAL)

This work

 BL138

BL063 ΔmycAL::chimaeric AL domain 3 (regions 1, 2, and 3 derived from mycAL and regions 4 and 5 derived from ituAL)

This work

 BL139

BL063 ΔmycAL::chimaeric AL domain 4 (regions 1, 2, 3, and 4 derived from mycAL and region 5 derived from ituAL)

This work

 BL083

BL063 Δerm-PrplGB-fenF-mycAL-mycACP::spec

This work

 XyyyZ

BL063 ΔmycAL::ituAL_XyyyZ

This work

 BL113

ΔppsABCDE::spec, sfp::lpa-14-cat, ΔsigF

This work

 BL144

ΔppsABCDE::spec-ituA’-ituB-ituC, sfp::lpa-14-cat, ΔsigF, srfAB::kan

This work

 BL127

ΔppsABCDE::erm-PrplGB-ituD-ituA-ituB-ituC, sfp::lpa-14-cat, ΔsigF, srfAB::kan

This work

 BL128

BL127 ΔituAL::mycAL

This work

 F208L

BL127 ΔituAL::ituAL_F208L

This work

 K287R

BL127 ΔituAL::ituAL_K287R

This work

 A332T

BL127 ΔituAL::ituAL_A332T

This work

 F208L, K287R

BL127 ΔituAL::ituAL_F208L, K287R

This work

 F208L, K287R, A332T

BL127 ΔituAL::ituAL_F208L, K287R, A332T

This work

 F208X

BL127 ΔituAL::ituAL_F208X

This work

 MycAL_L208X

BL127 ΔituAL::mycAL_L208X

This work

Fungi

 Rhizoctonia solani

Wild-type (MAFF 242303)

Genebank Project, NARO

Yeast

 Saccharomyces cerevisiae BY4742

MATalpha his3Δ1 leu2Δ0 lys2Δ0 ura3Δ0

Horizon Discovery, Ltd.

Plasmids

 pUC19

Cloning vector

New England Biolabs

 pUC19-mycU-erm-PrplGB-fenF-ituAL-mycACP-mycAD

QuikChange template plasmid for generating XyyyZ strains

This work

 pUC19-mycU-erm-PrplGB-ituD-ituAL-ituACP-ituAD

Construction of BL127

QuikChange template plasmid for generating F208X strains

This work

 pUC19-mycU-erm-PrplGB-ituD-mycAL-ituACP-ituAD

Construction of BL128

QuikChange template plasmid for generating MycAL_L208X strains

This work

 pET28a

Cloning vector for protein expression

Merck

 pET28a-ituAL-ACP1

Expression vector for His-tagged ItuAL_WT-MycACP

This work

 pET28a-ituAL_F208G-ACP1

Expression vector for His-tagged ItuAL_F208G-MycACP

This work