Table 2 PGFinder identification of N-terminal peptides from RopA1,2,3, RopB, and pRL90069 anchored to the disaccharide-tripeptide gm-AEJ

From: A software tool and strategy for peptidoglycomics, the high-resolution analysis of bacterial peptidoglycans via LC-MS/MS

 

Structure

Av. Intensity

TY1

TY2

TY3

Sum

RopA1,2,3, RopB or PRL90069

gm-AEJAD

2.52E+07

3.66E+07

2.05E+07

1.86E+07

2.52E+07

RopA1,2,3 or RopB

gm-AEJADA

1.69E+08

2.35E+08

1.66E+08

1.07E+08

1.69E+08

RopA1,2,3

gm-AEJADAIVA

8.03E+07

7.96E+07

6.78E+07

9.36E+07

 

gm-AEJADAIVAA

1.14E+07

1.87E+07

9.81E+06

5.74E+06

 

gm-AEJADAIVAAEPEPVE

8.19E+06

9.59E+06

4.72E+06

1.03E+07

 

gm-AEJADAIV

7.24E+06

8.39E+06

7.55E+06

5.77E+06

 

gm-AEJADAIVAAEPEPV

2.41E+06

3.28E+06

1.14E+06

2.79E+06

 

gm-AEJADAI

1.24E+06

1.54E+06

1.14E+06

1.04E+06

 

gm-AEJADAIVAAE

9.13E+05

9.10E+05

9.26E+05

9.02E+05

 

gm-AEJADAIVAAEPEP

6.88E+04

6.88E+04

ND

ND

1.12E+08

RopB or pRL90069

gm-AEJADAV/gm-AEJADLG

3.01E+06

3.91E+06

2.84E+06

2.28E+06

3.01E+06

RopB

gm-AEJADAVDQVPEAPVAQ

1.69E+07

1.44E+07

1.29E+07

2.35E+07

 

gm-AEJADAVDQVPEAPVAQE

2.50E+06

2.96E+06

2.31E+06

2.23E+06

 

gm-AEJADAVD

2.28E+06

3.18E+06

2.33E+06

1.32E+06

 

gm-AEJADAVDQVPEAP

1.40E+06

1.48E+06

1.61E+06

1.12E+06

2.31E+07

pRL90069

gm-AEJADLGTRTYEEPDLRNGV

8.12E+06

1.56E+07

4.60E+06

4.17E+06

 

gm-AEJADL

5.55E+06

5.43E+06

6.16E+06

5.08E+06

 

gm-AEJADLGTR

5.13E+06

6.56E+06

4.55E+06

4.29E+06

1.88E+07

 

3.51E+08