Fig. 4: Arthrobacter pangenome analysis. | ISME Communications

Fig. 4: Arthrobacter pangenome analysis.

From: Genotype to ecotype in niche environments: adaptation of Arthrobacter to carbon availability and environmental conditions

Fig. 4

A Visualized pangenome of the 41 Arthrobacter isolates with fully circularized genomes including core (present in all genomes), soft-core (present in 95–99% of genomes) shell (present in 5–95% of genomes), and cloud (present in 1–5% of genomes) gene clusters. B Number of carbohydrate-active enzyme protein-coding genes present in the core, soft-core, shell, and cloud genomes. C Gene clusters were categorized by KEGG Brite category and the fraction of gene clusters from each category contributing to each KEGG Brite module was plotted as a bar graph by core (green), soft-core (black stripe), shell (gold), and cloud (pink pattern). Gene clusters not mapping to a KEGG Brite module were not included in fraction calculation.

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