Fig. 5: Duganella phylogenetic tree based on clustering at 90% identity.
From: High-resolution phylogenetic and population genetic analysis of microbial communities with RoC-ITS
The 99 Duganella RoC-ITS sequences form 7 distinct clades consistent with the number of rrns in other related Duganella strains with complete genomes. Note that because many of the differences were associated with gapped regions, for this tree all dashes in the MSA were replaced with A’s thereby better capturing the relationship between the distinct rrns. The tree scale shows the number of edits per base per unit length.
