Extended Data Fig. 1: zTPM correlates with zFPKM. | Nature Cardiovascular Research

Extended Data Fig. 1: zTPM correlates with zFPKM.

From: The BulkECexplorer compiles endothelial bulk transcriptomes to predict functional versus leaky transcription

Extended Data Fig. 1

Correlation of zTPM and zFPKM units for a selection of 146 vascular, neuronal, glial, immune and bone genes from 220 bulk RNA-seq datasets (unimodal datasets were not analysed). R, Pearson correlation coefficient, two sided p value 0 TPM were plotted (n = 18784). The red stippled line indicates the published threshold for leaky gene expression of −2.38 zFKPM for HUVEC is transposed into a corresponding TPM threshold.

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