Table 5 Illumina paired end WGS statistics.
From: Extensive sequencing of seven human genomes to characterize benchmark reference materials
Genome | Coverage (x) | Read length | percent duplicate paired reads | Fragment Length Median (bp) | Fragment length standard deviation (bp) | read 1 percent aligned | read 2 percent aligned | read 1 mismatch rate (%) | read 2 mismatch rate (%) |
|---|---|---|---|---|---|---|---|---|---|
HG002 | 290 | 2×150 | 1.3 | 567 | 150 | 95.6 | 94.2 | 0.49 | 0.73 |
HG003 | 294 | 2×150 | 1.3 | 562 | 146 | 94.8 | 93.2 | 0.49 | 0.73 |
HG004 | 324 | 2×150 | 1.3 | 562 | 143 | 96.0 | 93.8 | 0.49 | 0.84 |
HG005 | 306 | 2×250 | 3.9 | 577 | 154 | 96.7 | 94.6 | 0.97 | 1.58 |
GM24694 | 105 | 2×150 | 3.7 | 560 | 146 | 95.8 | 93.9 | 0.51 | 0.78 |
GM24695 | 106 | 2×150 | 3.5 | 560 | 140 | 96.2 | 93.9 | 0.49 | 0.83 |
