Table 6 Annotation deposit.

From: De novo transcriptome assembly databases for the butterfly orchid Phalaenopsis equestris

Transcriptome annotation

File name

File type

Data description

fb. annotation

fb.blastx.cog.xls

xls

COG database annotation

 

fb.blastx.kegg.xls

xls

KEGG database annotation

 

fb.blastx.nr.xlsx

xlsx

Nr database annotation

 

fb.cds

fasta

predicted coding sequence

 

fb.pep

fasta

predicted protein sequence

L5. annotation

L5.blastx.cog.xls

xls

COG database annotation

 

L5.blastx.kegg.xls

xls

KEGG database annotation

 

L5.blastx.nr.xlsx

xlsx

Nr database annotation

 

L5.cds

fasta

predicted coding sequence

 

L5.pep

fasta

predicted protein sequence

L6. annotation

L6.blastx.cog.xls

xls

COG database annotation

 

L6.blastx.kegg.xls

xls

KEGG database annotation

 

L6.blastx.nr.xlsx

xlsx

Nr database annotation

 

L6.cds

fasta

predicted coding sequence

 

L6.pep

fasta

predicted protein sequence

PHA. annotation

PHA.blastx.cog.xls

xls

COG database annotation

 

PHA.blastx.kegg.xls

xls

KEGG database annotation

 

PHA.blastx.nr.xlsx

xlsx

Nr database annotation

 

PHA.cds

fasta

predicted coding sequence

 

PHA.pep

fasta

predicted protein sequence

4_day_seed_annotation

4_day_seed.blastx.cog.xls

xls

COG database annotation

 

4_day_seed.blastx.kegg.xls

xls

KEGG database annotation

 

4_day_seed.blastx.nr.xls

xls

Nr database annotation

 

4_day_seed.cds

fasta

predicted coding sequence

 

4_day_seed.pep

fasta

predicted protein sequence

7_day_seed_annotation

7_day_seed.blastx.cog.xls

xls

COG database annotation

 

7_day_seed.blastx.kegg.xls

xls

KEGG database annotation

 

7_day_seed.blastx.nr.xls

xls

Nr database annotation

 

7_day_seed.cds

fasta

predicted coding sequence

 

7_day_seed.pep

fasta

predicted protein sequence

12_day_seed_annotation

12_day_seed.blastx.cog.xls

xls

COG database annotation

 

12_day_seed.blastx.kegg.xls

xls

KEGG database annotation

 

12_day_seed.blastx.nr.xls

xls

Nr database annotation

 

12_day_seed.cds

fasta

predicted coding sequence

 

12_day_seed.pep

fasta

predicted protein sequence

column_annotation

column_day_seed.blastx.cog.xls

xls

COG database annotation

 

column_day_seed.blastx.kegg.xls

xls

KEGG database annotation

 

column_day_seed.blastx.nr.xls

xls

Nr database annotation

 

column_day_seed.cds

fasta

predicted coding sequence

 

column_day_seed.pep

fasta

predicted protein sequence

lip_annotation

lip_day_seed.blastx.cog.xls

xls

COG database annotation

 

lip_day_seed.blastx.kegg.xls

xls

KEGG database annotation

 

lip_day_seed.blastx.nr.xls

xls

Nr database annotation

 

lip_day_seed.cds

fasta

predicted coding sequence

 

lip_day_seed.pep

fasta

predicted protein sequence

sepal_annotation

sepal_day_seed.blastx.cog.xls

xls

COG database annotation

 

sepal_day_seed.blastx.kegg.xls

xls

KEGG database annotation

 

sepal_day_seed.blastx.nr.xls

xls

Nr database annotation

 

sepal_day_seed.cds

fasta

predicted coding sequence

 

sepal_day_seed.pep

fasta

predicted protein sequence

petal_annotation

petal_day_seed.blastx.cog.xls

xls

COG database annotation

 

petal_day_seed.blastx.kegg.xls

xls

KEGG database annotation

 

petal_day_seed.blastx.nr.xls

xls

Nr database annotation

 

petal_day_seed.cds

fasta

predicted coding sequence

 

petal_day_seed.pep

fasta

predicted protein sequence

  1. The dataset contains functional annotations and gene coding sequence annotations for 11 tissues. There are five annotation files per tissue: three functional annotation files and two structural annotation files. The three functional annotation files are the COG, KEGG and Nr database annotation files. The.cds and.pep files are in fasta format; the titles in the files contain the unigene name predicted coding sequence, the locus and the coding direction. The annotation file was deposited in the Dryad Digital Repository (Data Citation 1).
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