Table 8 Quality control and data statistics of the raw reads.
From: De novo transcriptome assembly databases for the butterfly orchid Phalaenopsis equestris
Type | L5_root | L6_stem | PHA_leaf | fb_flower bud | 12_day seed | 7_day seed | 4_day seed | column | lip | petal | sepal |
|---|---|---|---|---|---|---|---|---|---|---|---|
Read number | 49,848,468 | 66,141,114 | 15,999,780 | 70,571,268 | 53,861,172 | 53,200,618 | 52,791,758 | 53,212,746 | 51,175,078 | 54,004,470 | 51,191,360 |
Read length | 90 | 90 | 75 | 90 | 90 | 90 | 90 | 90 | 90 | 90 | 90 |
Q20 (%) | 95.8 | 94.1 | 88.9 | 94.5 | 99.9 | 99.9 | 99.9 | 99.8 | 99.9 | 99.8 | 99.7 |
GC percentage (%) | 45 | 46 | 49 | 48 | 48 | 48 | 48 | 48 | 46 | 47 | 49 |
