Table 1 Deep sequencing pools A-I, their sources and references.
From: Nasopharyngeal metagenomic deep sequencing data, Lancaster, UK, 2014–2015
Set | BioSample | Source | Clinical | pool size | Experiment | SRA | Run | Bases |
|---|---|---|---|---|---|---|---|---|
A | SAMN05954283 | Paediatric, Low RNA | Coryza | 3 | SRX2310763 | SRS1768710 | SRR4733499 | 1.1 G |
B | SAMN05954284 | Paediatric, High RNA | Coryza | 2 | SRX2310764 | SRS1768711 | SRR4733500 | 964.8 M |
C | SAMN05954285 | Adult, High fluC IgG | Coryza | 10 | SRX2310765 | SRS1768712 | SRR4733501 | 345.6 M |
D | SAMN05954286 | Adult | Fever | 8 | SRX2310766 | SRS1768713 | SRR4733502 | 714.3 M |
E | SAMN05954287 | Adult | Asymptomatic | 10 | SRX2310759 | SRS1768706 | SRR4733495 | 909.7 M |
F | SAMN05954288 | Adult | Asthmatic | 10 | SRX2310760 | SRS1768707 | SRR4733496 | 477.5 M |
G | SAMN05954289 | Adult | COPD | 6 | SRX2310761 | SRS1768708 | SRR4733497 | 1.5 G |
H | SAMN05954290 | adult | Influenza C positive | 1 | SRX2310762 | SRS1768709 | SRR4733498 | 14 G |
I | SAMN05954291 | Adult | Influenza C positive | 1 | SRX2310758 | SRS1768705 | SRR4733494 | 1.2 G |
