Table 6 Mouse strains Specification of mouse strains used as host and as source of cells for each video.

From: Leukocyte Tracking Database, a collection of immune cell tracks from intravital 2-photon microscopy videos

VideoID

Host

Host provider

Host reference

Cells

Cell source

Cell source reference

Comment

CS001

BLT NOD.scid humanized mice

MGH Humanized mouse core

https://www.ncbi.nlm.nih.gov/pubmed/19420076

CD4+ T cells

BLT NOD.scid humanized mice

https://www.ncbi.nlm.nih.gov/pubmed/19420076

central memory-like CD4+ T cells were isolated and expanded from syngeneic BLT humanized mice, infected with HIV-GFP or labeled with Celltracker Orange (CMTMR) and injected to the host

CS002

BLT NOD.scid humanized mice

MGH Humanized mouse core

https://www.ncbi.nlm.nih.gov/pubmed/19420076

CD4+ T cells

BLT NOD.scid humanized mice

https://www.ncbi.nlm.nih.gov/pubmed/19420076

central memory-like CD4+ T cells were isolated and expanded from syngeneic BLT humanized mice, infected with HIV-GFP or labeled with Celltracker Orange (CMTMR) and injected to the host

CS003

BLT NOD.scid humanized mice

MGH Humanized mouse core

https://www.ncbi.nlm.nih.gov/pubmed/19420076

CD4+ T cells

BLT NOD.scid humanized mice

https://www.ncbi.nlm.nih.gov/pubmed/19420076

central memory-like CD4+ T cells were isolated and expanded from syngeneic BLT humanized mice, infected with HIV-GFP or labeled with Celltracker Orange (CMTMR) and injected to the host

CS004

CD11c-EYFP

Jackson

https://www.jax.org/strain/08829

Neutrophils

UBC-CFP mice

https://www.jax.org/strain/004218

Neutrophils expressing CFP were isolated from CK6/ECFP mice and injeted to the host animal

CS005

C57BL/6Jrj

Janvier laboratories

https://www.janvier-labs.com/rodent-research-models-services/research-models/per-species/inbred-mice/product/c57bl6jrj.html

Neutrophils

UBC-GFP mice

https://www.jax.org/strain/004353

Neutrophils expressing GFP were isolated from UBC-GFP mice and injected to the host animal

CS006

BLT NOD.scid humanized mice

MGH Humanized mouse core

https://www.ncbi.nlm.nih.gov/pubmed/19420076

CD4+ T cells

BLT NOD.scid humanized mice

https://www.ncbi.nlm.nih.gov/pubmed/19420076

central memory-like CD4+ T cells were isolated and expanded from syngeneic BLT humanized mice, infected with HIV-GFP or labeled with Celltracker Orange (CMTMR) and injected to the host

CS007

C57BL/6Jrj

Janvier laboratories

https://www.janvier-labs.com/rodent-research-models-services/research-models/per-species/inbred-mice/product/c57bl6jrj.html

Neutrophils

UBC-GFP mice

https://www.jax.org/strain/004353

Neutrophils expressing GFP were isolated from UBC-GFP mice and injected to the host animal

CS008

LysMcre GFP

Jackson

https://www.jax.org/strain/004781

Neutrophils

host

  

CS009

CD19-RFP

Thelen Lab, IRB Bellinzona

https://www.ncbi.nlm.nih.gov/pubmed/17171761

Neutrophils

LysMcre GFP mice

Gonzalez lab, IRB Bellinzona

Neutrophils expressing GFP were isolated from UBC-GFP mice and injected to the host animal

CS010

CD11c-EYFP

Jackson

https://www.jax.org/strain/08829

Neutrophils

UBC-CFP mice

https://www.jax.org/strain/004218

Neutrophils expressing CFP were isolated from CK6/ECFP mice and injeted to the host animal

CS011

LysMcre GFP

Jackson

https://www.jax.org/strain/004781

Neutrophils

host

  

CS012

C57BL/6J

Charles River

https://www.criver.com/products-services/find-model/jax-c57bl6j-mice?region=3616

T Cells

Ndr DKO mice

TKI, Bern

Ndr DKO mice were generated by crossing Ndr1−/−Ndr2f/f mice with mice expressing cre recombinase driven by the lck proximal promoter [Jackson Laboratory, B6.Cg-Tg (Lck-cre; 548Jxm/J stock #003802)]. All of the mice used for experiments were backcrossed to C57BL/6J mice for at least six generations. The C57BL/6J mice used for adoptive trans- fer experiments were purchased from Charles River.

CS013

CD11c-EYFP

Jackson

https://www.jax.org/strain/08829

Neutrophils

UBC-CFP mice

https://www.jax.org/strain/004218

Neutrophils expressing CFP were isolated from CK6/ECFP mice and injeted to the host animal

CS014

C57BL/6Jrj

Janvier laboratories

https://www.janvier-labs.com/rodent-research-models-services/research-models/per-species/inbred-mice/product/c57bl6jrj.html

Neutrophils

UBC-CFP mice, UBG-GFP mice

https://www.jax.org/strain/004218, https://www.jax.org/strain/004353

Neutrophils expressing CFP were isolated from CK6/ECFP mice and neutrophils expressing GFP were isolated from UBC-GFP mice. Both were injeted to the host animal. Additionally, the host animal was injected with CD169 PE

CS015

CD11c-EYFP

Jackson

https://www.jax.org/strain/08829

Neutrophils

UBC-CFP mice, P2rx7-/- mice

https://www.jax.org/strain/004218, https://www.jax.org/strain/005576

Cells were isolated from a UBC-CFP animal and from a P2rx7-/- animal labeled with CMTMR, then injected to the host animal

CS016

CD11c-EYFP

Jackson

https://www.jax.org/strain/08829

Neutrophils

UBC-CFP mice, P2rx7-/- mice

https://www.jax.org/strain/004218, https://www.jax.org/strain/005576

Cells were isolated from a UBC-CFP animal and from a P2rx7-/- animal labeled with CMTMR, then injected to the host animal

CS017

CD11c-EYFP

Jackson

https://www.jax.org/strain/08829

Neutrophils

UBC-CFP mice, P2rx7-/- mice

https://www.jax.org/strain/004218, https://www.jax.org/strain/005576

Cells were isolated from a UBC-CFP animal and from a P2rx7-/- animal labeled with CMTMR, then injected to the host animal

CS018

Ncr1 GFP

Jackson

https://www.jax.org/strain/022739

Natural killer cells

host

  

LTDB001

CD11c-EYFP

Jackson

https://www.jax.org/strain/08829

Neutrophils

UBC-CFP mice

https://www.jax.org/strain/004218

Neutrophils expressing CFP were isolated from CK6/ECFP mice and transfected to the host animal

LTDB002

CD11c-EYFP

Jackson

https://www.jax.org/strain/08829

Neutrophils

UBC-CFP mice

https://www.jax.org/strain/004218

Neutrophils expressing CFP were isolated from CK6/ECFP mice and transfected to the host animal

LTDB003

CD11c-EYFP

Jackson

https://www.jax.org/strain/08829

Neutrophils

UBC-CFP mice

https://www.jax.org/strain/004218

Neutrophils expressing CFP were isolated from CK6/ECFP mice and transfected to the host animal

LTDB004

C57BL/6Jrj

Janvier laboratories

https://www.janvier-labs.com/rodent-research-models-services/research-models/per-species/inbred-mice/product/c57bl6jrj.html

Neutrophils

UBC-CFP mice, UBC-GFP mice, C57BL/6Jrj mice

https://www.jax.org/strain/004218, https://www.jax.org/strain/004353, https://www.janvier-labs.com/rodent-research-models-services/research-models/per-species/inbred-mice/product/c57bl6jrj.html

Neutrophils expressing CFP were isolated from CK6/ECFP mice, Neutrophils expressing GFP were isolated from UBC-GFP mice. Neuttrophils were isolated from B6 animals and labeled with CMTMR. The three different cells were injeted to the host animal.

LTDB005

C57BL/6Jrj

Janvier laboratories

https://www.janvier-labs.com/rodent-research-models-services/research-models/per-species/inbred-mice/product/c57bl6jrj.html

Neutrophils

UBC-CFP mice, UBC-GFP mice, C57BL/6Jrj mice

https://www.jax.org/strain/004218, https://www.jax.org/strain/004353, https://www.janvier-labs.com/rodent-research-models-services/research-models/per-species/inbred-mice/product/c57bl6jrj.html

Neutrophils expressing CFP were isolated from CK6/ECFP mice, Neutrophils expressing GFP were isolated from UBC-GFP mice. Neuttrophils were isolated from B6 animals and labeled with CMTMR. The three different cells were injeted to the host animal.

LTDB006

C57BL/6Jrj

Janvier laboratories

https://www.janvier-labs.com/rodent-research-models-services/research-models/per-species/inbred-mice/product/c57bl6jrj.html

Neutrophils

UBC-CFP mice, UBC-GFP mice, C57BL/6Jrj mice

https://www.jax.org/strain/004218, https://www.jax.org/strain/004353, https://www.janvier-labs.com/rodent-research-models-services/research-models/per-species/inbred-mice/product/c57bl6jrj.html

Neutrophils expressing CFP were isolated from CK6/ECFP mice, Neutrophils expressing GFP were isolated from UBC-GFP mice. Neuttrophils were isolated from B6 animals and labeled with CMTMR. The three different cells were injeted to the host animal.

LTDB007

C57BL/6Jrj

Janvier laboratories

https://www.janvier-labs.com/rodent-research-models-services/research-models/per-species/inbred-mice/product/c57bl6jrj.html

Neutrophils

UBC-CFP mice, UBG-GFP mice

https://www.jax.org/strain/004218, https://www.jax.org/strain/004353

Neutrophils expressing CFP were isolated from CK6/ECFP mice and neutrophils expressing GFP were isolated from UBC-GFP mice. Both were injeted to the host animal. Additionally, the host animal was injected with CD169 PE

LTDB008

CD11c-EYFP

Jackson

https://www.jax.org/strain/08829

Neutrophils

UBC-CFP mice

https://www.jax.org/strain/004218

Neutrophils expressing CFP were isolated from CK6/ECFP mice and transfected to the host animal

LTDB009

CD11c-EYFP

Jackson

https://www.jax.org/strain/08829

Neutrophils

UBC-CFP mice

https://www.jax.org/strain/004218

Neutrophils expressing CFP were isolated from CK6/ECFP mice and transfected to the host animal

LTDB010

LysMcre GFP

Jackson

https://www.jax.org/strain/004781

B Cells

LysMcre-GFP mice

Gonzalez lab, IRB Bellinzona

B Cells were isolated from non-GFP littermates (coming from the LysM-Cre-GFP crossings) and labelled with Celltracker violet

LTDB011

CD19-RFP

Thelen Lab, IRB Bellinzona

https://www.ncbi.nlm.nih.gov/pubmed/17171761

Neutrophils

LysMcre GFP mice

Gonzalez lab, IRB Bellinzona

Neutrophils expressing GFP were isolated from LysMcre-GFP mice and injected to the host animal

LTDB012

BLT NOD.scid humanized mice

MGH Humanized mouse core

https://www.ncbi.nlm.nih.gov/pubmed/19420076

CD4+ T cells

BLT NOD.scid humanized mice

MGH Humanized mouse core

central memory-like CD4+ T cells were isolated and expanded from syngeneic BLT humanized mice, labelled with Celltracker green and injected to the host

LTDB013

BLT NOD.scid humanized mice

MGH Humanized mouse core

https://www.ncbi.nlm.nih.gov/pubmed/19420076

CD4+ T cells

BLT NOD.scid humanized mice

MGH Humanized mouse core

central memory-like CD4+ T cells were isolated and expanded from syngeneic BLT humanized mice, infected with HIV-GFP or labeled with Celltracker Orange (CMTMR) and injected to the host

LTDB014

BALB/c

Jackson

https://www.jax.org/strain/017580

CD8+ T cells, Ag+ B cells, B Cells

CL4 mice, BALB/c mice

MGH, Jackson

Balb/c (Jackson) to which HA-specific CD8 (purified from CL4 mice, bred in house at Massachusetts General Hospital) transduced with NFAT-GFP and H2B-RFP were transferred 2 days before imaging. Upon imaging, two populations of differentially labeled B cells (purified from Balb/c mice, Jackson) were also transferred.

LTDB015

C57BL/6J

Charles River

https://www.criver.com/products-services/find-model/jax-c57bl6j-mice?region=3616

T Cells

Ndr DKO mice

TKI Bern

Ndr DKOmicewere generated by crossing Ndr1−/−Ndr2f/f mice with mice expressing cre recombinase driven by the lck proximal promoter [Jackson Laboratory, B6.Cg-Tg (Lck-cre; 548Jxm/J stock #003802)]. All of the mice used for experiments were backcrossed to C57BL/6J mice for at least six generations. The C57BL/6J mice used for adoptive trans- fer experiments were purchased from Charles River.

LTDB016

CD11c-EYFP

Jackson

https://www.jax.org/strain/08829

Neutrophils

UBC-CFP mice, P2rx7-/- mice

https://www.jax.org/strain/004218, https://www.jax.org/strain/005576

Cells were isolated from a UBC-CFP animal and from a P2rx7-/- animal labeled with CMTMR, then injected to the host animal

LTDB017

CD11c-EYFP

Jackson

https://www.jax.org/strain/08829

Neutrophils

UBC-CFP mice, P2rx7-/- mice

https://www.jax.org/strain/004218, https://www.jax.org/strain/005576

Cells were isolated from a UBC-CFP animal and from a P2rx7-/- animal labeled with CMTMR, then injected to the host animal

LTDB018

CD11c-EYFP

Jackson

https://www.jax.org/strain/08829

Natural killer cells

C57BL/6Jrj

Janvier laboratories

Natural killer cells were isolated from a B6 animal, labelled with CMTMR and injected to the host animal

LTDB019

CD11c-EYFP

Jackson

https://www.jax.org/strain/08829

Natural killer cells

C57BL/6Jrj

Janvier laboratories

Natural killer cells were isolated from a B6 animal, labelled with Celltracker violet and injected to the host animal

LTDB020

IFNg eYFP

Jackson

https://www.jax.org/strain/017580

Natural killer cells

C57BL/6Jrj

Janvier laboratories

Natural killer cells were isolated from a B6 animal, labelled with CMTMR and injected to the host animal