Figure 3: Genome-wide association studies of plant height based on both SVs and gene PAVs.
From: Novel sequences, structural variations and gene presence variations of Asian cultivated rice
(a) genome-wide association study based on SVs including deletions, duplications and inversions; (b) genome-wide association study based on PAVs of distributed genes. The left panels show the Manhattan plots and the right panels show the quantile-quantile plots. The thresholds of significant P-values were 5.1e-7 and 4.2e-7, respectively (with bonferroni correction, significant level at 0.01).
