Table 2 Alignment of statistical results of reads.
Sample name | Control-1 | Control-2 | Control-3 | igf3-dsRNA-1 | igf3-dsRNA-2 | igf3-dsRNA-3 |
|---|---|---|---|---|---|---|
Raw reads | 103838052 | 129702320 | 109996624 | 98107722 | 130263708 | 91249756 |
Clean reads | 99410868 | 123563848 | 104194694 | 94321406 | 122675946 | 89307666 |
Clean base (G) | 14.91 | 18.53 | 15.63 | 14.15 | 18.4 | 13.4 |
Total mapped reads | 81530347(82.01%) | 99404340(80.45%) | 85870625(82.41%) | 77049685(81.69%) | 99493319(81.10%) | 73064096(81.81%) |
Multiple mapped | 12853963(12.93%) | 18112363(14.66%) | 12915566(12.40%) | 15084557(15.99%) | 15762693(12.85%) | 10390489(11.63%) |
Uniquely mapped | 68676384(69.08%) | 81291977(65.79%) | 72955059(70.02%) | 61965128(65.70%) | 83730626(68.25%) | 62673607(70.18%) |
Read-1 mapped | 34516969(34.72%) | 40477251(32.76%) | 36673789(35.20%) | 31095154(32.97%) | 41919370(34.17%) | 31496714(35.27%) |
Read-2 mapped | 34159415(34.36%) | 40814726(33.03%) | 36281270(34.82%) | 30869974(32.73%) | 41811256(34.08%) | 31176893(34.91%) |
Reads map to ‵+′ | 34383536(34.59%) | 40550020(32.82%) | 36580679(35.11%) | 31056772(32.93%) | 41822537(34.09%) | 31350486(35.10%) |
Reads map to ‵−′ | 34292848(34.50%) | 40741957(32.97%) | 36374380(34.91%) | 30908356(32.77%) | 41908089(34.16%) | 31323121(35.07%) |
