Figure 1: Experimental design and overview of ChIP targets. | Scientific Data

Figure 1: Experimental design and overview of ChIP targets.

From: Epigenetic and transcriptional profiling of triple negative breast cancer

Figure 1

(a) HCC1806 cells were cultured and harvested for PRO-seq and ChIP-exo. PRO-seq measures nascent transcription. ChIP-exo identifies the exonuclease left and right borders that flank protein-DNA interactions. (b) Illustration of the genomic context for ChIP targets: Pol II, H2A.Z, H3K4me3, H3K4me2, H3K4me1, H3K27ac, H3K9ac, H3K27me3, H4K20me1, and CTCF.

Back to article page