Table 1 Fold-change in autophagy-lysosomal pathway gene activity in transcriptomic profiles of CLL cells following Tnv-6-treatment (n = 5). Negative values reflect down-regulation of gene expression
Gene | fold change | p value |
---|---|---|
aryl hydrocarbon receptor nuclear translocator | 1.58 | 0.038 |
calnexin | 1.58 | <0.001 |
calpain 10 | 1.44 | 0.032 |
chromatin modifying protein 2B | 1.76 | 0.001 |
cyclin-dependent kinase inhibitor 1A (p21, Cip1) | 2.7 | 0.028 |
cystatin B (stefin B) | 3.17 | 0.008 |
cystinosis, nephropathic | 2.15 | 0.004 |
DnaJ (Hsp40) homolog, subfamily B, member 9 | 1.55 | 0.018 |
Fas (TNFRSF6)-associated via death domain | −1.63 | 0.033 |
galactosamine (N-acetyl)-6-sulfate sulfatase | −1.52 | 0.044 |
hexosaminidase A (alpha polypeptide) | 2.08 | 0.017 |
inositol hexaphosphate kinase 1 | 1.48 | 0.027 |
lysosomal-associated membrane protein 1 | 2.54 | <0.001 |
lysosomal-associated membrane protein 2 | 1.8 | 0.027 |
Niemann-Pick disease, type C2 | 2.25 | 0.017 |
optineurin | 2.61 | 0.003 |
phosphoinositide-3-kinase, class 3 | 1.17 | 0.0248 |
unc-51-like kinase 3 (C. elegans) | 1.53 | <0.001 |
upstream transcription factor 2, c-fos interacting | 1.73 | 0.011 |
vacuolar protein sorting 41 (yeast) | 1.34 | 0.042 |